Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887726.1_cds_XP_016442218.1_37504
CDS Infomation

[gene=LOC107767655] [db_xref=GeneID:107767655] [protein=protein NLP5-like] [protein_id=XP_016442218.1] [location=join(118837..119742,120067..120114,120195..121140,121312..122186)] [gbkey=CDS]
Sequence

ATGTCAATGGATGAAAGACTTGTTGTTACCAATACTTTCTTGACGACTCAATTTGATTCC
TTCATGGATTTGGATTACATGGACGAACTGTTGTTAGAAGGGTGTTTTTTGGAGACTATT
GATGATCGTGAATTTGCGCATCATAGACCATCCATTTCCAATATGCCGTTTGACTCTTCA
TTCGTGTGGCCTACTTTATTAGATACCAATGATGTCGAATTTAGTGGAAGCCCATCGAAA
GATGGCCAACAAGAAAGGCAAAGGTTATCTTTCTCCAAGAATTTATCTGTAAGCCAATTC
CAAGAGCTAAATTCAGTTAAAGTTCAGTCTTTTGGTGAGAATTCGATTAATGCCATGTGC
AGTTCAGGTCAGTCTGACTGTTTATTTGACGCTCCTGAACTGAGTAGGAGGTGGTGGATT
GGACCCAATGATTCATCATCTGTAATGGACAGATTGATTCAAGCACTTGGATACATAAAG
AATTGCTCCAAAGACAAGGATATCCTTATTCAAATATGGGTACCCATATACAGGGATGGC
AAACGCGTACTCTCTACAAATGATCAACCTTTCTCGCTAGACCTTAATTGCCCTAGGCTT
GCCCACTACAGACAAGCGTCTTTAAACTATCAATTTCCTGCAAACGATGATTCTAAAGAG
ATGGTTGGATTACCGGGCAGAGTTTTTCTGGATAAAGTTCCTGAGTGGACTCCTGATGTT
CAGTTCTTCCAAATGGAAGAGTATCCGCGTGTTGGACATGCACAGCAGTATAACGTACGA
GGCACCCTTGCTGTTCCTGTGTTTGAACAAGGCAGTCGTAACTGCTTGAGTGTTATTGAA
GTTGTCAGGACCACACAAAAGATCAAATATAGCTCTGAGCTTGAAAGTGTCTGCAAAGCT
CTTGAGGCTGTTGATCTTCGGAGTTCTGAAGTATCAAGCACTCTGACAGCGAAGGCATGT
GATTTGACCTACCAAGCGGCGTTATCTGAAATTCTAGAGGTTCTAAAATCTGCATGCAAG
ACACATGGATTGCCATTAGCTCAGACTTGGGTACCTTGCATTCAACATGGAAAAGGGGGT
AGCCGCCACTCTAATGAAAACCTCATTCATTGTGTTTCCACAGAGGATTCTGCTTGCTAT
GTAGCTGATCCTCGAGTTCAGGGTTTTCATGAAGCCTGCTCTGAGCACCATTTGCTGAAA
GGCCAGGGTGTTGTTGGGAGTGCATTTATGACGAACCAACCGTGTTTTACAGCTGATCTA
ACTTCCTATAGCAAGGCAGAATATCCACTTTCTCATTATGCAAGAATGTTTGGGTTGCAT
GCTGCTGTAGCTATACGTCTGCGGAGTATGTCAACTGGCTCATCCGACTTTGTATTGGAG
TTCTTTTTACCGCCAAATTGCAGAAATCCTGAAGAACATAAAAGAATGCTCACTTCATTG
TCCATTATCATACAAAACGTTTGTCAGACATTCCGGGTTGTGTCAGACAAAGAATTACAG
GACGAAACTGTCTCATTAGGTGAAGTGACAAGCGTTGCAGCTAGTGAATACAGTGAAGAA
GTGAGAGAACAAGAACGCAAAGGGTCCATTGTATCTTCGCAAGAAAGGACGTCGTGGACC
TCTAGTCATGAAGAGGTCCAGGAGACTTCGAGTGTTGTTTCAGCATTCCAAGATGAACTG
CTGACTGAAGAACCTGTAGCGCTTAGGAACCAAACGAATTCTGGTTCAGCGACCGCTTTT
GCCTTTAGCAGAAACTATCGTACTGCTGGAGAGGGCATCTCTCATAATTGGCGTAAAGCA
AGAGACAGAAGACGTTTGAAGGCAGAGAAAAATATTACATTGCAAATTCTTCAGCAGTAC
TTTGCCGGTAGCCTGAAGGATGCTGCAAAAAGCATTGGTGTTTGTCCTACCACTCTGAAG
AGGATATGCAGGCAACATGGAATTCAGCGATGGCCTTCTCGGAAGATAAAGAAGGTCGGT
CTCTCCTTAGAAAGGATCCAACGTGTTATCAACTCAGTCCAAGGTGTCTCTGGCACTTTA
CAAATTGAATCCTTCTATTCAGACTTCCCAGAATTTGCATCTTCAAATATATCAAGATCA
AGTCCCTTTGCAGACCCAACACCGACTAATCACCCGGAGGACTTGAACAGGCAACCAGAA
AGTGGTGGTAACAATGCTGCTACATCTAAGTCAGTCTCCTCGTCCTGTAGTCAAGGTTCC
AGTTCAAGTCAACGTTCAATCGGGACACAGCCACATCCTTACCCGTCAAATGTTGCAGGT
CACGAAGATCCAGTGGCCGAGGAAGCTTCTGATAATCATGCATTAAAAAGGGTTAACAGT
GATGCTGAGCTGCATTTATCAAGTGAAGCACTAAATCCACAGCCAAGATCTCAAAGCCAT
GCGTCTCTTACTGAGAGTCCTAAATCAGTAAGTCTTTCGCCCATGAAAAAGAGTCTGGAG
AGATCTCAAGAAGGTGCCCCAAGAATAAAAGTAATACATGGAGAAGAGAAGATTAGATTC
CGCATTCAAAAGAATTGGGGATATAAAGAACTGATGAGAGAAATTGCCAGGCGATTTGGC
GTAGATGATCCAAGTGGATTTCACCTTAAATACTTGGATGATGATTCTGACTGGGTATTA
TTGACGTGCGAAGCTGATCTGGAGGAATGCATCGATGTTTGTTGGTCTTCCCAAAACAAA
ATGATTAGACTCCTTTTTCTTTGTGATTCACAGCCTCATTTAGGAAGCTCTTTTGGTAGC
AGCAGTTCCTTGTGA

Peptide Sequence

PEP ID

XP_016442218.1
PEP Infomation

PREDICTED: protein NLP5-like [Nicotiana tabacum]
Sequence

MSMDERLVVTNTFLTTQFDSFMDLDYMDELLLEGCFLETIDDREFAHHRPSISNMPFDSS
FVWPTLLDTNDVEFSGSPSKDGQQERQRLSFSKNLSVSQFQELNSVKVQSFGENSINAMC
SSGQSDCLFDAPELSRRWWIGPNDSSSVMDRLIQALGYIKNCSKDKDILIQIWVPIYRDG
KRVLSTNDQPFSLDLNCPRLAHYRQASLNYQFPANDDSKEMVGLPGRVFLDKVPEWTPDV
QFFQMEEYPRVGHAQQYNVRGTLAVPVFEQGSRNCLSVIEVVRTTQKIKYSSELESVCKA
LEAVDLRSSEVSSTLTAKACDLTYQAALSEILEVLKSACKTHGLPLAQTWVPCIQHGKGG
SRHSNENLIHCVSTEDSACYVADPRVQGFHEACSEHHLLKGQGVVGSAFMTNQPCFTADL
TSYSKAEYPLSHYARMFGLHAAVAIRLRSMSTGSSDFVLEFFLPPNCRNPEEHKRMLTSL
SIIIQNVCQTFRVVSDKELQDETVSLGEVTSVAASEYSEEVREQERKGSIVSSQERTSWT
SSHEEVQETSSVVSAFQDELLTEEPVALRNQTNSGSATAFAFSRNYRTAGEGISHNWRKA
RDRRRLKAEKNITLQILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIQRWPSRKIKKVG
LSLERIQRVINSVQGVSGTLQIESFYSDFPEFASSNISRSSPFADPTPTNHPEDLNRQPE
SGGNNAATSKSVSSSCSQGSSSSQRSIGTQPHPYPSNVAGHEDPVAEEASDNHALKRVNS
DAELHLSSEALNPQPRSQSHASLTESPKSVSLSPMKKSLERSQEGAPRIKVIHGEEKIRF
RIQKNWGYKELMREIARRFGVDDPSGFHLKYLDDDSDWVLLTCEADLEECIDVCWSSQNK
MIRLLFLCDSQPHLGSSFGSSSSL

Transcript Sequence

Gene sequence data has not been registered.